Open Access
Table 7
Percentages of in silico amplicons correctly assigned with Mothur and DADA2 from Kingdom to species levels: for CYA359F/CYA781Rd primer pair with the 16S reference library; for ECLA23S_F1/ECLA23S_R1 primer pair with the 23S reference library.
| Taxonomic ranks | 16S: CYA359F/CYA781Rd | 23S: ECLA23S_F1/ECLA23S_R1 | ||
|---|---|---|---|---|
| DADA2 | Mothur | DADA2 | Mothur | |
| Kingdom | 99.62% | 99.63% | 99.83% | 99.72% |
| Phylum | 99.30% | 99.30% | 99.61% | 99.50% |
| Class | 99.13% | 99.13% | 99.39% | 99.33% |
| Order | 94.79% | 94.82% | 98.83% | 98.83% |
| Family | 88.43% | 88.59% | 95.66% | 95.83% |
| Genus | 77.20% | 77.31% | 90.26% | 90.43% |
| Species | 54.91% | 54.62% | 79.24% | 79.91% |
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