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Cited article:

Which barcode to decipher freshwater microalgal assemblages? Tests on mock communities

Microalgae taxa can be identified with short DNA barcodes. Eight primer pairs for 16S and five for 23S were tested in silico and with mock communities including cyanobacteria and eukaryotic microalgae. We conclude that the 23S primer pair ECLA23S_F1/ECLA23S_R1 was the best candidate to decipher freshwater phytoplankton communities.

Int. J. Lim., 59 (2023) 8
DOI: https://doi.org/10.1051/limn/2023008

Assessing the relevance of DNA metabarcoding compared to morphological identification for lake phytoplankton monitoring

Maria Mercedes Nicolosi Gelis, Alexis Canino, Agnès Bouchez, Isabelle Domaizon, Christophe Laplace-Treyture, Frédéric Rimet and Benjamin Alric
Science of The Total Environment 914 169774 (2024)
https://doi.org/10.1016/j.scitotenv.2023.169774